STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC42860.1ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (192 aa)    
Predicted Functional Partners:
SKC42711.1
NitT/TauT family transport system substrate-binding protein.
 
     0.976
SKC41855.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.953
SKC41565.1
NitT/TauT family transport system permease protein.
 
 
 0.941
SKC41426.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.937
SKC82234.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.842
SKC41696.1
NitT/TauT family transport system ATP-binding protein.
  
 
 0.821
SKC41705.1
NitT/TauT family transport system permease protein.
  
 
 0.750
SKC84310.1
NitT/TauT family transport system permease protein.
  
 
 0.750
SKC90792.1
NitT/TauT family transport system permease protein.
  
 
 0.750
SKC90813.1
Taurine transport system permease protein.
  
 
 0.750
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.