STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC50368.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component. (836 aa)    
Predicted Functional Partners:
SKC50375.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 
 0.956
SKC50385.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily.
  
 
  0.835
SKC50418.1
Oligopeptide transport system ATP-binding protein.
  
 
 0.808
SKC70391.1
Leucine Rich repeats (2 copies).
  
 0.801
nadK
NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
    
 0.749
SKC49787.1
Oligopeptide transport system substrate-binding protein.
 
 
 0.722
SKC92513.1
Oligopeptide transport system substrate-binding protein.
 
 
 0.693
SKC86077.1
Oligopeptide transport system substrate-binding protein.
 
 
 0.688
SKC92511.1
Oligopeptide transport system substrate-binding protein.
 
 
 0.688
SKC40065.1
MacB-like core domain-containing protein.
  
  
  0.681
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.