STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC53859.1N-carbamoyl-L-amino-acid hydrolase. (399 aa)    
Predicted Functional Partners:
SKC92602.1
(S)-ureidoglycine aminohydrolase.
 
 
 0.923
SKC53901.1
Allantoinase.
 
 
 0.855
SKC92594.1
Allantoinase.
 
 
 0.820
SKC69848.1
Dihydropyrimidinase.
 
 
 0.791
SKC84807.1
Dihydropyrimidinase.
 
 
 0.785
SKC36005.1
Dihydropyrimidinase.
 
 
 0.778
SKC42598.1
Dihydroorotate dehydrogenase (subfamily 1) family protein.
 
 0.769
SKC70611.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
 
 0.767
SKC69859.1
Dihydroorotate dehydrogenase (fumarate).
  
 0.753
SKC42361.1
N-acyl-D-aspartate/D-glutamate deacylase.
 
 
 0.742
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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