STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC54449.1PTS system, D-glucosaminate-specific IIA component. (140 aa)    
Predicted Functional Partners:
SKC54395.1
PTS system IID component, Man family (TC 4.A.6).
 
 0.985
SKC54405.1
PTS system, D-glucosaminate-specific IIC component.
 
 0.981
SKC54434.1
PTS system, D-glucosaminate-specific IIB component.
 
 
 0.979
SKC37290.1
PTS system IID component, Man family (TC 4.A.6).
 
 0.952
SKC69892.1
PTS system IID component, Man family.
 
 0.952
SKC84508.1
PTS system IID component, Man family (TC 4.A.6).
 
 0.951
SKC83077.1
PTS system IID component, Man family (TC 4.A.6).
 
 0.950
SKC89404.1
PTS system IID component, Man family (TC 4.A.6).
 
 0.950
SKC85770.1
PTS system, mannose-specific IID component.
 
 0.948
SKC83081.1
PTS system, mannose-specific IIC component.
 
 0.935
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.