STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC55281.1Glycerol-3-phosphate dehydrogenase. (479 aa)    
Predicted Functional Partners:
SKC55276.1
Thioredoxin reductase.
 
 0.984
SKC55266.1
CxxC motif-containing protein.
 
    0.962
SKC89710.1
Sarcosine oxidase subunit alpha.
 
 0.949
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
 
 0.906
SKC84242.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.888
SKC89714.1
CxxC motif-containing protein.
 
    0.854
SKC61560.1
Citrate synthase.
  
 
 0.851
SKC48796.1
Sarcosine oxidase subunit alpha.
 
 0.818
SKC90921.1
NADPH-dependent glutamate synthase beta chain.
 
 
  0.800
SKC83658.1
Formate dehydrogenase major subunit.
  
 
 0.786
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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