STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC62714.1DNA adenine methylase. (251 aa)    
Predicted Functional Partners:
SKC62704.1
Hypothetical protein.
       0.613
SKC62686.1
Uncharacterized membrane protein.
       0.510
SKC82937.1
Phage tail sheath protein.
 
    0.500
SKC62656.1
N-acetylmuramoyl-L-alanine amidase.
       0.493
SKC62664.1
Haemolysin XhlA.
       0.492
SKC57888.1
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
  
 0.490
SKC82860.1
Protein of unknown function.
 
    0.475
SKC59319.1
Uncharacterized phage protein gp47/JayE.
 
    0.459
SKC68563.1
Helix-turn-helix domain-containing protein.
  
     0.454
SKC71587.1
Helix-turn-helix domain-containing protein.
  
     0.454
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.