STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC63600.1PTS system IIB component, Gat family (TC 4.A.5). (94 aa)    
Predicted Functional Partners:
SKC63636.1
PTS system, galactitol-specific IIC component.
 
 
 0.971
SKC63534.1
PTS system, galactitol-specific IIA component.
 
 
 0.965
SKC54716.1
PTS system, galactitol-specific IIA component.
 
 
 0.949
SKC83445.1
PTS system IIA component, Gat family (TC 4.A.5).
 
 
 0.949
SKC54682.1
PTS system galactitol-specific EIIC component, Gat family (TC 4.A.5.1.1).
 
 
 0.948
SKC69481.1
PTS system unknown substrate IIC component, Gat family (TC 4.A.5.1.3).
 
 
 0.948
SKC83434.1
PTS system IIC component, Gat family (TC 4.A.5).
 
 
 0.948
SKC87920.1
PTS system IIC component, Gat family (TC 4.A.5).
 
 
 0.948
SKC87923.1
PTS system IIA component, Gat family.
 
 
 0.948
SKC69507.1
PTS system, galactitol-specific IIA component.
 
 
 0.920
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.