STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC65709.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (322 aa)    
Predicted Functional Partners:
SKC54246.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
   
 
0.943
SKC65695.1
Peptide/nickel transport system permease protein.
 
  0.935
SKC38770.1
Peptide/nickel transport system permease protein.
 
 
  0.923
SKC36691.1
Peptide/nickel transport system permease protein.
 
 
  0.908
SKC65702.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.898
SKC65687.1
Peptide/nickel transport system permease protein.
 
 
  0.882
SKC76145.1
Peptide/nickel transport system permease protein.
 
 
  0.881
SKC86158.1
Peptide/nickel transport system permease protein.
 
 
  0.879
SKC84907.1
Oligopeptide transport system permease protein.
 
 
  0.865
SKC75896.1
Peptide/nickel transport system permease protein.
 
 
  0.844
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.