STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC65906.1Mannonate dehydratase. (414 aa)    
Predicted Functional Partners:
SKC86297.1
2-dehydro-3-deoxygluconokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.856
SKC84393.1
Altronate hydrolase.
 
 
 0.843
SKC36334.1
4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.832
SKC84409.1
D-altronate dehydratase.
 
 
 0.807
iolC
5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP).
 
  
 0.805
SKC82075.1
Fructuronate reductase.
    
 0.788
SKC86325.1
2-dehydro-3-deoxygluconokinase.
 
  
 0.785
uxuA-2
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.768
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
  0.764
SKC76252.1
Fructoselysine 6-kinase.
    
 0.751
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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