STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC66184.1Two-component system, response regulator YesN. (542 aa)    
Predicted Functional Partners:
SKC66191.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.982
SKC70812.1
PAS domain S-box-containing protein.
   
 0.895
SKC74254.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 0.886
SKC74364.1
Flagellar motor switch protein FliM.
  
 0.862
SKC74356.1
Flagellar motor switch protein FliN/FliY.
  
 0.838
SKC84747.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.830
SKC91808.1
Putative regulator of cell autolysis.
 
 0.827
SKC89900.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.815
SKC39710.1
AraC-type DNA-binding protein.
 
  
0.766
SKC41517.1
Two-component system, LytT family, sensor histidine kinase LytS.
 
 
 0.745
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.