STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC66516.1Adenine-specific DNA methylase, N12 class. (2021 aa)    
Predicted Functional Partners:
SKC66531.1
DNA primase (bacterial type).
   
 0.949
SKC66492.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
     0.917
SKC66487.1
Chromosome partitioning protein.
     0.821
SKC66509.1
DNA repair protein RadC.
 
     0.799
SKC80076.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
     0.778
SKC77772.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
     0.768
SKC73268.1
Protein of unknown function.
   
 0.756
SKC77841.1
DNA primase (bacterial type).
   
 0.748
SKC66500.1
Hypothetical protein.
       0.746
SKC80068.1
Type IV secretion system protein VirD4.
 
    0.720
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.