STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC69367.1Uncharacterized protein. (452 aa)    
Predicted Functional Partners:
SKC70152.1
Six-cysteine peptide SCIFF.
 
 
 
 0.870
SKC69362.1
Uncharacterized protein.
 
    
0.758
SKC69383.1
ABC-type multidrug transport system, ATPase and permease component.
 
     0.731
SKC37820.1
Putative Flp pilus-assembly TadE/G-like.
  
     0.708
SKC69935.1
Glycosyl transferase family 2.
  
     0.672
SKC69667.1
Hypothetical protein.
  
 
 0.636
SKC76595.1
Arylsulfatase A.
  
 
 0.636
SKC83047.1
Arylsulfatase A.
  
 
 0.636
SKC83057.1
Choline-sulfatase.
  
 
 0.636
SKC83609.1
Arylsulfatase A.
  
 
 0.636
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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