STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC70055.12-amino-4-ketopentanoate thiolase beta subunit. (469 aa)    
Predicted Functional Partners:
SKC70067.1
Hypothetical protein.
 
  
  0.981
SKC70071.1
2,4-diaminopentanoate:NAD(P)+ oxidoreductase.
 
  
 0.967
SKC87709.1
Serine O-acetyltransferase.
  
 0.963
SKC70037.1
D-ornithine 4,5-aminomutase E subunit.
 
  
 0.943
SKC84942.1
Methionine-gamma-lyase.
  
 0.937
SKC86289.1
Hypothetical protein.
 
  
  0.922
SKC70046.1
D-ornithine 4,5-aminomutase S subunit.
 
     0.915
SKC70034.1
Conserved hypothetical protein.
 
     0.906
SKC40893.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.872
SKC90809.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 
 0.853
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.