STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC71686.1Phage uncharacterized protein (putative large terminase), C-terminal domain-containing protein. (588 aa)    
Predicted Functional Partners:
SKC71691.1
Mu-like prophage protein gp29.
 
     0.945
SKC71696.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.945
SKC71701.1
Mu-like prophage I protein.
 
     0.871
SKC71707.1
Hypothetical protein.
 
     0.864
SKC71710.1
Mu-like prophage major head subunit gpT.
 
    0.863
SKC71714.1
Mu-like prophage protein gp36.
 
     0.862
SKC71718.1
Phage virion morphogenesis (putative tail completion) protein.
 
     0.862
SKC71591.1
DNA transposition protein, AAA+ family ATPase.
 
     0.809
SKC71643.1
Hypothetical protein.
       0.787
SKC71648.1
Hypothetical protein.
       0.787
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.