STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC72200.1Stage III sporulation protein AB (spore_III_AB). (156 aa)    
Predicted Functional Partners:
SKC72196.1
Stage III sporulation protein AA.
 
  
 0.998
SKC72218.1
Stage III sporulation protein AE.
 
  
 0.990
SKC72215.1
Stage III sporulation protein AD.
 
  
 0.988
SKC72214.1
Stage III sporulation protein AC.
 
  
 0.985
SKC72230.1
Stage III sporulation protein AG.
 
  
 0.983
SKC72224.1
Stage III sporulation protein AF.
 
  
 0.982
SKC72417.1
Stage II sporulation protein M.
  
  
 0.913
SKC72233.1
Stage III sporulation protein AH.
 
  
 0.891
SKC79602.1
Sporulation protein YqfC.
  
  
 0.857
SKC72306.1
SpoIVB peptidase. Serine peptidase. MEROPS family S55.
 
   
 0.817
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.