STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC72385.1Copper transport outer membrane protein, MctB. (300 aa)    
Predicted Functional Partners:
SKC72376.1
Uncharacterized membrane-anchored protein.
 
  
 0.987
SKC72396.1
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
 
     0.892
SKC72401.1
Protein of unknown function.
 
     0.860
SKC72391.1
Glycosyltransferases, probably involved in cell wall biogenesis.
 
     0.848
SKC69667.1
Hypothetical protein.
 
     0.785
SKC70518.1
Protein of unknown function.
  
     0.701
SKC88401.1
Peptidase MA superfamily protein.
  
     0.700
SKC83471.1
Protein of unknown function.
  
     0.698
SKC88001.1
MazG nucleotide pyrophosphohydrolase domain-containing protein.
  
     0.653
SKC84978.1
Protein of unknown function.
  
     0.626
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.