STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC73865.1Transcriptional regulator. (277 aa)    
Predicted Functional Partners:
SKC73871.1
Uncharacterized protein, UPF0261 family.
  
 0.998
SKC80852.1
Hypothetical protein.
  
  
 0.810
SKC90462.1
LPXTG-motif cell wall anchor domain-containing protein.
   
    0.656
SKC73888.1
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
  
 
0.531
SKC37844.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
   
 
  0.427
SKC73858.1
Hypothetical protein.
       0.415
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.