STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC76515.14Fe-4S dicluster domain-containing protein. (316 aa)    
Predicted Functional Partners:
SKC85452.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.916
SKC85567.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.898
SKC83658.1
Formate dehydrogenase major subunit.
  
 
 0.872
SKC46407.1
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 
 0.868
SKC76508.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.833
SKC84815.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.820
SKC90921.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.800
SKC84242.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.785
SKC40893.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.778
SKC51267.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 
 0.765
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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