STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC76692.1Transcriptional regulator, TetR family. (223 aa)    
Predicted Functional Partners:
SKC72476.1
Energy-coupling factor transport system substrate-specific component.
 
   
 0.726
SKC84486.1
ATP-binding cassette, subfamily B.
  
   
 0.722
SKC72481.1
Energy-coupling factor transport system permease protein.
  
     0.696
SKC84485.1
ATP-binding cassette, subfamily B.
  
   
 0.691
SKC81147.1
ATP-binding cassette, subfamily B.
  
   
 0.684
SKC72490.1
Energy-coupling factor transport system ATP-binding protein.
  
     0.672
SKC81150.1
ATP-binding cassette, subfamily B.
  
   
 0.662
SKC81129.1
ATP-binding cassette, subfamily B.
  
   
 0.640
SKC81125.1
ATP-binding cassette, subfamily B.
  
   
 0.611
SKC76685.1
L-2-amino-thiazoline-4-carboxylic acid hydrolase.
   
 
 0.500
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.