STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC79404.1Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). (179 aa)    
Predicted Functional Partners:
SKC88101.1
Thioredoxin.
  
 0.820
SKC88103.1
Thioredoxin.
  
 0.820
SKC83336.1
Small redox-active disulfide protein 2.
  
 0.813
SKC91797.1
Small redox-active disulfide protein 2.
  
 0.813
SKC75532.1
Thioredoxin reductase.
  
 
 0.732
SKC82380.1
Thioredoxin reductase (NADPH).
  
 
 0.732
SKC39509.1
Sarcosine oxidase subunit alpha.
  
 
 0.700
SKC48796.1
Sarcosine oxidase subunit alpha.
  
 
 0.700
SKC55276.1
Thioredoxin reductase.
  
 
 0.700
SKC89710.1
Sarcosine oxidase subunit alpha.
  
 
 0.700
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.