STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC80088.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
SKC80092.1
Hypothetical protein.
       0.778
SKC80094.1
Retron-type reverse transcriptase.
       0.773
SKC80084.1
Hypothetical protein.
       0.746
SKC80080.1
Hypothetical protein.
       0.674
SKC80097.1
Four helix bundle protein.
       0.419
SKC80100.1
Hypothetical protein.
       0.419
SKC80103.1
Hypothetical protein.
       0.419
SKC80106.1
Hypothetical protein.
       0.419
SKC80111.1
Hypothetical protein.
       0.419
SKC80115.1
Uncharacterized phage protein gp47/JayE.
       0.419
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.