STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC81051.1Fe-S cluster assembly ATP-binding protein. (233 aa)    
Predicted Functional Partners:
SKC81054.1
Hypothetical protein.
 
 0.999
SKC51088.1
Selenocysteine lyase/Cysteine desulfurase.
 
 0.963
SKC69785.1
Modular FeS cluster scaffolding protein NifU.
  
 
 0.930
SKC70562.1
Nitrogen fixation protein NifU.
  
 
 0.909
SKC88914.1
Cysteine desulfurase family protein.
 
 0.902
SKC35962.1
Selenocysteine lyase/Cysteine desulfurase.
 
 
 0.876
SKC76010.1
Cysteine desulfurase family protein.
 
 0.865
SKC40557.1
Selenocysteine lyase/Cysteine desulfurase.
  
 
 0.815
SKC42483.1
Xanthine dehydrogenase accessory factor.
  
 
 0.815
SKC81056.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
     
 0.679
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.