STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC81449.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (321 aa)    
Predicted Functional Partners:
SKC81430.1
Peptide/nickel transport system permease protein.
 
 0.986
SKC54236.1
Peptide/nickel transport system ATP-binding protein.
 
 
0.963
SKC54303.1
Peptide/nickel transport system ATP-binding protein.
 
 
0.957
SKC81417.1
Peptide/nickel transport system substrate-binding protein.
  
 
  0.955
SKC81459.1
Peptide/nickel transport system ATP-binding protein.
 
  
 
0.949
SKC38770.1
Peptide/nickel transport system permease protein.
 
 
 0.936
SKC76145.1
Peptide/nickel transport system permease protein.
 
 
 0.909
SKC81424.1
Peptide/nickel transport system permease protein.
 
 0.909
SKC76977.1
Putative ABC transport system ATP-binding protein.
 
  
 
0.899
SKC86158.1
Peptide/nickel transport system permease protein.
 
 
 0.897
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.