STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC82136.1Acetyltransferases. (130 aa)    
Predicted Functional Partners:
SKC55638.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
  
 0.649
SKC82141.1
Hypothetical protein.
       0.642
SKC90943.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.587
SKC55651.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
  
 
 0.584
SKC35471.1
Asparagine synthase (glutamine-hydrolysing).
  
 
 0.579
SKC64144.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.578
SKC72755.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.578
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
 
 0.575
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.563
SKC56476.1
Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
    
 0.562
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.