STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC82967.1Amino acid ABC transporter ATP-binding protein, PAAT family. (245 aa)    
Predicted Functional Partners:
SKC76309.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 0.999
SKC82962.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 0.999
SKC40589.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.998
SKC82952.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.
 
 0.988
SKC76303.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.972
SKC40591.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.965
SKC55562.1
Putative ABC transport system permease protein.
 
   
  0.928
SKC84872.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.918
SKC47453.1
Putative ABC transport system permease protein.
 
   
  0.910
SKC86331.1
Putative ABC transport system permease protein.
 
   
  0.905
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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