STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC84497.1DNA-binding transcriptional regulator, FadR family. (232 aa)    
Predicted Functional Partners:
SKC84490.1
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.805
SKC65898.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
     0.629
SKC86552.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
     0.601
SKC83658.1
Formate dehydrogenase major subunit.
    
 0.577
SKC84499.1
Hypothetical protein.
       0.550
SKC84501.1
L-serine dehydratase.
     
 0.550
SKC84503.1
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
 0.522
SKC92808.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
  
 0.420
SKC63712.1
DNA-binding transcriptional regulator, GntR family.
  
    0.410
SKC92884.1
Sodium pump decarboxylases, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
   
 
 0.402
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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