STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC84772.1Cd2+/Zn2+-exporting ATPase. (808 aa)    
Predicted Functional Partners:
SKC83290.1
Cu+-exporting ATPase.
 
0.996
SKC35498.1
Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.991
SKC83293.1
Copper ion binding protein.
 
 0.965
SKC84770.1
Transcriptional regulator, ArsR family.
 
  
 0.951
SKC81158.1
Cu+-exporting ATPase.
 
0.919
SKC81162.1
Copper chaperone.
  
 0.918
SKC83287.1
Copper ion binding protein.
 
 0.918
SKC36109.1
EcsC protein family protein.
  
 0.893
SKC84325.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
 
 
 0.745
SKC70081.1
DNA-binding transcriptional regulator, FrmR family.
  
  
 0.699
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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