STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC86328.1Lysophospholipase L1. (195 aa)    
Predicted Functional Partners:
SKC40239.1
Hypothetical protein.
  
 0.934
SKC47466.1
Hypothetical protein.
  
 0.853
SKC57713.1
Uncharacterized phage protein (possible DNA packaging).
  
 0.853
SKC82851.1
Endopolygalacturonase.
  
 0.853
SKC57592.1
Phage tail tape measure protein, TP901 family, core region.
   
   0.726
SKC57571.1
Phage tail protein.
  
   0.678
SKC62564.1
Phage tail protein.
  
   0.678
SKC80072.1
S-layer homology domain-containing protein.
  
  0.657
SKC40938.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
    
 0.637
SKC81966.1
Hypothetical protein.
     
 0.623
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.