STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC86857.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
SKC86853.1
Protein of unknown function.
       0.773
SKC86861.1
Pilus assembly protein, ATPase of CpaF family.
       0.603
SKC86867.1
NUBPL iron-transfer P-loop NTPase.
       0.603
SKC86877.1
Flp pilus assembly protein RcpC/CpaB.
       0.603
SKC86847.1
Hypothetical protein.
       0.601
SKC86884.1
AAA domain-containing protein.
       0.576
SKC86888.1
Hypothetical protein.
       0.521
SKC86891.1
Hypothetical protein.
       0.521
SKC86893.1
Hypothetical protein.
       0.511
SKC86842.1
Hypothetical protein.
       0.475
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.