STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC89336.12,4-dienoyl-CoA reductase. (461 aa)    
Predicted Functional Partners:
SKC89345.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
 
 0.972
SKC89341.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
 0.928
SKC84242.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.823
SKC89349.1
C4-dicarboxylate-binding protein DctP.
       0.773
SKC69120.1
NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
     0.731
SKC89334.1
AraC-type DNA-binding protein.
 
    0.665
SKC83658.1
Formate dehydrogenase major subunit.
 
 
 0.654
SKC92884.1
Sodium pump decarboxylases, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
  
 
 0.646
SKC35924.1
Electron transfer flavoprotein beta subunit.
  
 
 0.631
SKC36307.1
Electron transfer flavoprotein beta subunit.
  
 
 0.631
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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