STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC89362.1C4-dicarboxylate transporter, DctM subunit. (418 aa)    
Predicted Functional Partners:
SKC89355.1
C4-dicarboxylate transporter, DctQ subunit.
 
 0.972
SKC86531.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 0.960
SKC89349.1
C4-dicarboxylate-binding protein DctP.
 
 0.955
SKC65876.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.952
SKC79441.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 0.949
SKC86538.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 0.942
SKC84415.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.926
SKC79436.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.925
SKC82005.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 
 0.922
SKC84418.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 0.922
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.