STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC89722.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
SKC92167.1
Ammonium transporter (TC 1.A.11).
  
 0.990
SKC89720.1
Kef-type K+ transport system, membrane component KefB.
 
   
 0.885
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.883
SKC43675.1
Tetratricopeptide repeat-containing protein.
    
 
 0.787
SKC49003.1
Hypothetical protein.
    
 
 0.787
SKC85225.1
Hypothetical protein.
    
 
 0.787
SKC86212.1
Cellulose synthase subunit.
    
 
 0.787
SKC84242.1
Glutamate synthase (NADPH/NADH) large chain.
  
  
 0.783
SKC54084.1
Phosphoribosylformylglycinamidine synthase.
     
 0.532
SKC76789.1
Aspartate ammonia-lyase.
     
 0.518
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.