SKC89837.1 protein (Maledivibacter halophilus)

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Score

SKC89837.1

RNA polymerase sigma-70 factor, ECF subfamily. (181 aa)

Predicted Functional Partners:

SKC89842.1

0.825

rpoC

0.740

rpoB

0.729

SKC64227.1

0.722

SKC89011.1

0.720

rpoA

0.688

rpoZ

0.688

SKC73007.1

0.687

SKC84388.1

0.680

topB

0.609

Your Current Organism:

Maledivibacter halophilus

NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SKC64227.1	SKC89837.1	SAMN02194393_01909	SAMN02194393_05084	Putative zinc-finger.	RNA polymerase sigma-70 factor, ECF subfamily.	0.722
SKC73007.1	SKC89837.1	SAMN02194393_02672	SAMN02194393_05084	Chemotaxis protein methyltransferase CheR.	RNA polymerase sigma-70 factor, ECF subfamily.	0.687
SKC84388.1	SKC89837.1	SAMN02194393_04092	SAMN02194393_05084	LuxR family transcriptional regulator, maltose regulon positive regulatory protein.	RNA polymerase sigma-70 factor, ECF subfamily.	0.680
SKC89011.1	SKC89837.1	SAMN02194393_04968	SAMN02194393_05084	Putative zinc-finger.	RNA polymerase sigma-70 factor, ECF subfamily.	0.720
SKC89837.1	SKC64227.1	SAMN02194393_05084	SAMN02194393_01909	RNA polymerase sigma-70 factor, ECF subfamily.	Putative zinc-finger.	0.722
SKC89837.1	SKC73007.1	SAMN02194393_05084	SAMN02194393_02672	RNA polymerase sigma-70 factor, ECF subfamily.	Chemotaxis protein methyltransferase CheR.	0.687
SKC89837.1	SKC84388.1	SAMN02194393_05084	SAMN02194393_04092	RNA polymerase sigma-70 factor, ECF subfamily.	LuxR family transcriptional regulator, maltose regulon positive regulatory protein.	0.680
SKC89837.1	SKC89011.1	SAMN02194393_05084	SAMN02194393_04968	RNA polymerase sigma-70 factor, ECF subfamily.	Putative zinc-finger.	0.720
SKC89837.1	SKC89842.1	SAMN02194393_05084	SAMN02194393_05085	RNA polymerase sigma-70 factor, ECF subfamily.	Hypothetical protein.	0.825
SKC89837.1	rpoA	SAMN02194393_05084	SAMN02194393_00032	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.688
SKC89837.1	rpoB	SAMN02194393_05084	SAMN02194393_05527	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.729
SKC89837.1	rpoC	SAMN02194393_05084	SAMN02194393_05528	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.740
SKC89837.1	rpoZ	SAMN02194393_05084	SAMN02194393_04677	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.688
SKC89837.1	topB	SAMN02194393_05084	SAMN02194393_05111	RNA polymerase sigma-70 factor, ECF subfamily.	DNA topoisomerase-3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.609
SKC89842.1	SKC89837.1	SAMN02194393_05085	SAMN02194393_05084	Hypothetical protein.	RNA polymerase sigma-70 factor, ECF subfamily.	0.825
rpoA	SKC89837.1	SAMN02194393_00032	SAMN02194393_05084	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-70 factor, ECF subfamily.	0.688
rpoA	rpoB	SAMN02194393_00032	SAMN02194393_05527	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	SAMN02194393_00032	SAMN02194393_05528	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	SAMN02194393_00032	SAMN02194393_04677	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
rpoA	topB	SAMN02194393_00032	SAMN02194393_05111	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA topoisomerase-3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.930