Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SKC36081.1 | SKC64036.1 | SAMN02194393_00117 | SAMN02194393_01893 | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | Purine-binding chemotaxis protein CheW. | 0.844 |
| SKC36081.1 | SKC70812.1 | SAMN02194393_00117 | SAMN02194393_02478 | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | PAS domain S-box-containing protein. | 0.974 |
| SKC36081.1 | SKC73007.1 | SAMN02194393_00117 | SAMN02194393_02672 | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | Chemotaxis protein methyltransferase CheR. | 0.626 |
| SKC36081.1 | SKC74232.1 | SAMN02194393_00117 | SAMN02194393_02835 | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | Purine-binding chemotaxis protein CheW. | 0.822 |
| SKC36081.1 | SKC74254.1 | SAMN02194393_00117 | SAMN02194393_02836 | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.936 |
| SKC36081.1 | SKC84747.1 | SAMN02194393_00117 | SAMN02194393_04200 | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.908 |
| SKC36081.1 | SKC89900.1 | SAMN02194393_00117 | SAMN02194393_05093 | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.922 |
| SKC36081.1 | SKC90127.1 | SAMN02194393_00117 | SAMN02194393_05118 | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | Methyl-accepting chemotaxis protein. | 0.859 |
| SKC36081.1 | cheB | SAMN02194393_00117 | SAMN02194393_02837 | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.437 |
| SKC36081.1 | cheD | SAMN02194393_00117 | SAMN02194393_02833 | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.527 |
| SKC64036.1 | SKC36081.1 | SAMN02194393_01893 | SAMN02194393_00117 | Purine-binding chemotaxis protein CheW. | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | 0.844 |
| SKC64036.1 | SKC70812.1 | SAMN02194393_01893 | SAMN02194393_02478 | Purine-binding chemotaxis protein CheW. | PAS domain S-box-containing protein. | 0.989 |
| SKC64036.1 | SKC73007.1 | SAMN02194393_01893 | SAMN02194393_02672 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein methyltransferase CheR. | 0.986 |
| SKC64036.1 | SKC74254.1 | SAMN02194393_01893 | SAMN02194393_02836 | Purine-binding chemotaxis protein CheW. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.999 |
| SKC64036.1 | SKC84747.1 | SAMN02194393_01893 | SAMN02194393_04200 | Purine-binding chemotaxis protein CheW. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.870 |
| SKC64036.1 | SKC89900.1 | SAMN02194393_01893 | SAMN02194393_05093 | Purine-binding chemotaxis protein CheW. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.954 |
| SKC64036.1 | SKC90127.1 | SAMN02194393_01893 | SAMN02194393_05118 | Purine-binding chemotaxis protein CheW. | Methyl-accepting chemotaxis protein. | 0.981 |
| SKC64036.1 | cheB | SAMN02194393_01893 | SAMN02194393_02837 | Purine-binding chemotaxis protein CheW. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.994 |
| SKC64036.1 | cheD | SAMN02194393_01893 | SAMN02194393_02833 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.951 |
| SKC70812.1 | SKC36081.1 | SAMN02194393_02478 | SAMN02194393_00117 | PAS domain S-box-containing protein. | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. | 0.974 |
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