STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC90805.1Hypothetical protein. (428 aa)    
Predicted Functional Partners:
SKC90818.1
Taurine transport system substrate-binding protein.
 
     0.780
SKC90803.1
Rhodanese-related sulfurtransferase.
 
  
 0.770
SKC90771.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
 
  
 0.760
SKC90809.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
    0.726
SKC90871.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
 
  
 0.640
SKC90802.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
 
  
 0.625
SKC90813.1
Taurine transport system permease protein.
 
     0.615
SKC90796.1
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
  
     0.498
SKC90766.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.488
SKC90827.1
Taurine transport system ATP-binding protein.
 
     0.464
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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