STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC91554.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
SKC91597.1
Sporulation protein YunB.
 
     0.972
SKC87349.1
Hypothetical protein.
  
     0.665
SKC69667.1
Hypothetical protein.
  
     0.641
SKC87347.1
Hypothetical protein.
  
     0.635
SKC91153.1
Spore cortex biosynthesis protein YabQ.
  
     0.626
SKC70518.1
Protein of unknown function.
  
     0.620
SKC50772.1
PrcB C-terminal.
  
     0.615
SKC81712.1
Small, acid-soluble spore protein, alpha/beta type.
  
     0.614
SKC51049.1
Hypothetical protein.
  
     0.609
SKC72779.1
NAD(P)H-flavin reductase.
  
     0.602
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.