STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC91605.1Propionate CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family. (517 aa)    
Predicted Functional Partners:
citD
Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.
  
 
 0.829
SKC85452.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.789
SKC85567.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.788
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.739
SKC55454.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.729
SKC91609.1
H+/gluconate symporter.
       0.706
SKC87130.1
[Acyl-carrier-protein] S-malonyltransferase.
  
 
 0.699
SKC90962.1
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
    
 0.684
SKC92349.1
acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.681
SKC42655.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.678
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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