STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC91918.1Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN. (181 aa)    
Predicted Functional Partners:
SKC88557.1
Ethanolamine utilization protein EutN.
 
 
 0.878
SKC81584.1
Ethanolamine utilization protein EutN.
 
 
 0.849
SKC38101.1
Ethanolamine utilization protein EutN.
 
 
 0.838
SKC91878.1
Ethanolamine utilization protein EutN.
 
 
 0.823
SKC35974.1
Ethanolamine utilization protein EutN.
 
 
 0.797
SKC81591.1
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit.
 
    0.796
SKC38103.1
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit.
 
    0.795
SKC54999.1
Ethanolamine utilization protein EutN.
 
 
 0.723
SKC81565.1
Ethanolamine utilization cobalamin adenosyltransferase.
 
  
 0.723
SKC38057.1
Ethanolamine utilization cobalamin adenosyltransferase.
 
  
 0.717
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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