STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC92039.1Transcriptional regulator, ArsR family. (91 aa)    
Predicted Functional Partners:
SKC92044.1
Uncharacterized membrane protein.
 
  
 0.985
SKC91793.1
Transcriptional regulator, ArsR family.
  
   
 0.672
SKC65222.1
Arsenite efflux ATP-binding protein ArsA.
    
 0.609
SKC84772.1
Cd2+/Zn2+-exporting ATPase.
 
  
 0.575
SKC83333.1
Transcriptional regulator, ArsR family.
  
   
 0.536
SKC83290.1
Cu+-exporting ATPase.
 
  
 0.484
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.438
SKC79408.1
NAD-dependent protein deacetylase, SIR2 family.
  
 
  0.432
SKC81158.1
Cu+-exporting ATPase.
 
  
 0.401
Your Current Organism:
Maledivibacter halophilus
NCBI taxonomy Id: 36842
Other names: ATCC 49637, Clostridium halophilium, Clostridium halophilum, DSM 5387, M. halophilus, strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.