Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFF66980.1 | SFF67000.1 | SAMN04488501_101148 | SAMN04488501_101149 | High-affinity iron transporter. | Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | 0.499 |
| SFF66980.1 | SFF67018.1 | SAMN04488501_101148 | SAMN04488501_101150 | High-affinity iron transporter. | Indolepyruvate ferredoxin oxidoreductase beta subunit. | 0.499 |
| SFF66980.1 | SFF67035.1 | SAMN04488501_101148 | SAMN04488501_101151 | High-affinity iron transporter. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.441 |
| SFF66980.1 | SFF67060.1 | SAMN04488501_101148 | SAMN04488501_101152 | High-affinity iron transporter. | Uncharacterized conserved protein, contains tandem ACT domains. | 0.405 |
| SFF67000.1 | SFF66980.1 | SAMN04488501_101149 | SAMN04488501_101148 | Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | High-affinity iron transporter. | 0.499 |
| SFF67000.1 | SFF67018.1 | SAMN04488501_101149 | SAMN04488501_101150 | Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | Indolepyruvate ferredoxin oxidoreductase beta subunit. | 0.991 |
| SFF67000.1 | SFF67035.1 | SAMN04488501_101149 | SAMN04488501_101151 | Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.913 |
| SFF67000.1 | SFF67060.1 | SAMN04488501_101149 | SAMN04488501_101152 | Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | Uncharacterized conserved protein, contains tandem ACT domains. | 0.905 |
| SFF67000.1 | nifJ_2 | SAMN04488501_101149 | SAMN04488501_10464 | Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.985 |
| SFF67000.1 | paaK | SAMN04488501_101149 | SAMN04488501_11098 | Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family. | 0.608 |
| SFF67018.1 | SFF66980.1 | SAMN04488501_101150 | SAMN04488501_101148 | Indolepyruvate ferredoxin oxidoreductase beta subunit. | High-affinity iron transporter. | 0.499 |
| SFF67018.1 | SFF67000.1 | SAMN04488501_101150 | SAMN04488501_101149 | Indolepyruvate ferredoxin oxidoreductase beta subunit. | Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | 0.991 |
| SFF67018.1 | SFF67035.1 | SAMN04488501_101150 | SAMN04488501_101151 | Indolepyruvate ferredoxin oxidoreductase beta subunit. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.907 |
| SFF67018.1 | SFF67060.1 | SAMN04488501_101150 | SAMN04488501_101152 | Indolepyruvate ferredoxin oxidoreductase beta subunit. | Uncharacterized conserved protein, contains tandem ACT domains. | 0.911 |
| SFF67018.1 | nifJ_2 | SAMN04488501_101150 | SAMN04488501_10464 | Indolepyruvate ferredoxin oxidoreductase beta subunit. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
| SFF67018.1 | paaK | SAMN04488501_101150 | SAMN04488501_11098 | Indolepyruvate ferredoxin oxidoreductase beta subunit. | Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family. | 0.561 |
| SFF67035.1 | SFF66980.1 | SAMN04488501_101151 | SAMN04488501_101148 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | High-affinity iron transporter. | 0.441 |
| SFF67035.1 | SFF67000.1 | SAMN04488501_101151 | SAMN04488501_101149 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | 0.913 |
| SFF67035.1 | SFF67018.1 | SAMN04488501_101151 | SAMN04488501_101150 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Indolepyruvate ferredoxin oxidoreductase beta subunit. | 0.907 |
| SFF67035.1 | SFF67060.1 | SAMN04488501_101151 | SAMN04488501_101152 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Uncharacterized conserved protein, contains tandem ACT domains. | 0.945 |
page 1 of 3