STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsxB_64Fe-4S binding domain-containing protein. (249 aa)    
Predicted Functional Partners:
nifJ_2
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.922
gltB_2
Glutamate synthase (NADH) large subunit.
    
  0.886
nifJ_1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.819
hndA_3
Thioredoxin-like [2Fe-2S] ferredoxin.
 
 
 0.758
hndD_1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
   
 0.743
hndD_2
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
   
 0.743
hndA_1
NADH-quinone oxidoreductase subunit E.
   
 0.725
hndA_2
NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein.
   
 0.725
hndC_1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
 0.714
hndC_2
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
 0.714
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.