STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF69844.1Peptidase propeptide and YPEB domain-containing protein. (780 aa)    
Predicted Functional Partners:
SFG07748.1
Protein of unknown function.
  
     0.554
SFF69292.1
Hypothetical protein.
  
     0.547
SFG73952.1
Protein of unknown function.
  
     0.529
SFF69861.1
Hypothetical protein; Belongs to the UPF0178 family.
       0.509
SFG45721.1
Predicted nucleotide-binding protein, sugar kinase/HSP70/actin superfamily.
  
     0.470
SFG41842.1
Sugar phosphate isomerase/epimerase.
  
     0.444
SFF81576.1
CopG family transcriptional regulator / antitoxin EndoAI.
  
     0.439
SFG87636.1
Hypothetical protein.
  
     0.421
SFG36442.1
Protein of unknown function; Belongs to the UPF0473 family.
  
     0.419
SFG54617.1
Aspartyl protease.
  
     0.413
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.