Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFF71427.1 | nfrA2_3 | SAMN04488501_101405 | SAMN04488501_101322 | ABC-2 type transport system permease protein. | Nitroreductase. | 0.576 |
| SFG21039.1 | nfrA2_3 | SAMN04488501_106187 | SAMN04488501_101322 | Multimeric flavodoxin WrbA. | Nitroreductase. | 0.490 |
| SFG50698.1 | birA | SAMN04488501_11052 | SAMN04488501_1292 | Lactoylglutathione lyase. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.613 |
| SFG50698.1 | cdr_1 | SAMN04488501_11052 | SAMN04488501_105165 | Lactoylglutathione lyase. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family. | 0.697 |
| SFG50698.1 | lcfB | SAMN04488501_11052 | SAMN04488501_11519 | Lactoylglutathione lyase. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.536 |
| SFG50698.1 | nfrA2_3 | SAMN04488501_11052 | SAMN04488501_101322 | Lactoylglutathione lyase. | Nitroreductase. | 0.497 |
| birA | SFG50698.1 | SAMN04488501_1292 | SAMN04488501_11052 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Lactoylglutathione lyase. | 0.613 |
| birA | lcfB | SAMN04488501_1292 | SAMN04488501_11519 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.551 |
| birA | nasF | SAMN04488501_1292 | SAMN04488501_103164 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Uroporphyrinogen III methyltransferase / synthase. | 0.563 |
| birA | nfrA2_3 | SAMN04488501_1292 | SAMN04488501_101322 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Nitroreductase. | 0.605 |
| cdr_1 | SFG50698.1 | SAMN04488501_105165 | SAMN04488501_11052 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family. | Lactoylglutathione lyase. | 0.697 |
| cdr_1 | lcfB | SAMN04488501_105165 | SAMN04488501_11519 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.861 |
| cdr_1 | nasF | SAMN04488501_105165 | SAMN04488501_103164 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family. | Uroporphyrinogen III methyltransferase / synthase. | 0.598 |
| cdr_1 | nfrA2_3 | SAMN04488501_105165 | SAMN04488501_101322 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family. | Nitroreductase. | 0.583 |
| echA8_6 | lcfB | SAMN04488501_101321 | SAMN04488501_11519 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.599 |
| echA8_6 | mmgB_3 | SAMN04488501_101321 | SAMN04488501_101320 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.984 |
| echA8_6 | nfrA2_3 | SAMN04488501_101321 | SAMN04488501_101322 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Nitroreductase. | 0.682 |
| echA8_6 | ydiF_7 | SAMN04488501_101321 | SAMN04488501_101323 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Propionate CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family. | 0.702 |
| lcfB | SFG50698.1 | SAMN04488501_11519 | SAMN04488501_11052 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Lactoylglutathione lyase. | 0.536 |
| lcfB | birA | SAMN04488501_11519 | SAMN04488501_1292 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.551 |
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