STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
drrA_2ABC-2 type transport system ATP-binding protein. (312 aa)    
Predicted Functional Partners:
SFF71427.1
ABC-2 type transport system permease protein.
 
 
 0.985
SFF71410.1
ABC-2 type transport system permease protein.
 
 
 0.978
SFG50984.1
ABC-2 type transport system permease protein.
 
 0.859
SFF78224.1
ABC-2 type transport system permease protein.
  
 0.835
drrB
ABC-2 type transport system permease protein.
 
 0.808
desK
Signal transduction histidine kinase.
 
  
 0.774
nreC
Two component transcriptional regulator, LuxR family.
 
  
 0.724
ybhR
ABC-2 type transport system permease protein.
 
 0.706
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.678
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.668
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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