STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxB_4Thioredoxin reductase. (419 aa)    
Predicted Functional Partners:
SFF65419.1
CxxC motif-containing protein.
    0.997
lhgO_2
Glycerol-3-phosphate dehydrogenase.
 
 0.986
lhgO_1
L-2-hydroxyglutarate oxidase LhgO.
 
 0.877
gltB_2
Glutamate synthase (NADH) large subunit.
    
 0.867
trxA_2
Thioredoxin; Belongs to the thioredoxin family.
  
 0.856
trxA_1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.826
SFF65375.1
Glycerol uptake operon antiterminator.
 
    0.818
cdr_1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.807
SFG35897.1
Thioredoxin.
  
 0.804
trxB_2
Thioredoxin reductase (NADPH).
  
0.804
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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