STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadCTranscriptional regulator, ArsR family. (133 aa)    
Predicted Functional Partners:
SFF77291.1
Arsenite transporter, ACR3 family.
 
  
 0.924
arsC
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.924
SFF77356.1
Hypothetical protein.
 
   
 0.565
yaaH_2
LysM domain-containing protein.
       0.532
aseR
Transcriptional regulator, ArsR family.
 
    
0.491
cdr_1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.
  
  
 0.482
SFF77400.1
Small redox-active disulfide protein 2.
 
   
 0.451
cadA
Cd2+/Zn2+-exporting ATPase.
 
  
 0.423
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.