STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flr_1Flavin reductase like domain-containing protein. (167 aa)    
Predicted Functional Partners:
preA
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
  
 
  0.667
mepA_1
Putative efflux protein, MATE family.
 
     0.602
abfD
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase.
  
 
 0.506
pyrK_1
NAD(P)H-flavin reductase.
 
 
  0.489
nifJ_2
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.489
SFG08188.1
Hypothetical protein.
       0.475
acdA_4
Acyl-CoA dehydrogenase.
    
 0.467
bluB
Nitroreductase.
 
 
 0.463
SFG50698.1
Lactoylglutathione lyase.
  
 
 0.454
fprA1_1
Flavorubredoxin.
 
  
 0.438
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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