STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloB_1Glyoxylase, beta-lactamase superfamily II. (296 aa)    
Predicted Functional Partners:
cdr_1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.
  
 0.937
cdr_2
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.828
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.534
npr_2
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
 0.499
SFF78777.1
D-lactate dehydrogenase (cytochrome).
    
 0.471
SFF90469.1
Glycolate oxidase.
    
 0.471
SFG50698.1
Lactoylglutathione lyase.
 
  
 0.448
SFG15386.1
methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
 
  
 0.431
nrdR_1
ATP cone domain-containing protein.
       0.414
asrB
NAD(P)H-flavin reductase.
  
  
  0.407
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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