STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG49331.1BMC domain-containing protein. (88 aa)    
Predicted Functional Partners:
eutN
Ethanolamine utilization protein EutN.
 
 
 
 0.980
sucD
Propionaldehyde dehydrogenase.
 
  
 0.932
pduA_3
Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN.
 
    0.914
pduL
Putative phosphotransacetylase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.854
SFG49373.1
BMC domain-containing protein.
 
     0.761
mtnB
L-fuculose-phosphate aldolase.
       0.670
pduA_2
BMC domain-containing protein.
 
    
0.568
SFF92283.1
Ethanolamine transporter.
 
  
 0.529
pduA_1
BMC domain-containing protein.
 
    
0.475
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.