STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG49373.1BMC domain-containing protein. (107 aa)    
Predicted Functional Partners:
eutN
Ethanolamine utilization protein EutN.
 
 
 
 0.933
mtnB
L-fuculose-phosphate aldolase.
 
     0.924
sucD
Propionaldehyde dehydrogenase.
 
  
 0.893
SFG49110.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.851
catJ
Glutaconate CoA-transferase subunit B.
 
     0.816
gctA
Glutaconate CoA-transferase subunit A.
 
     0.807
pduA_3
Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN.
 
   
 0.777
SFG49331.1
BMC domain-containing protein.
 
     0.761
rbsB_2
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
     0.733
mtnK
5'-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.
 
   
 0.648
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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